WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The quasi-likelihood F-test from the edgeR package was used to test these counts for statistically significant differential gene expression between water- and mianserin-treated samples, while controlling for expression differences between the 3 biological replicates. We performed multiple testing correction by using the Benjamini-Hochberg procedure to compute a false discovery rate (FDR) value for each gene, and we considered an FDR less than 10% to be significant. Description  Genes that increased expression in response to 50uM mianserin on adult day 3, which are not a response to aging. This is a list of 111 genes.
Primary Identifier  WBPaper00048926:miaserin_upregulated_adult-day3

0 Anatomy Terms

111 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000412 cdr-1 F35E8.11 Caenorhabditis elegans
WBGene00000585 cogc-2 C06G3.10 Caenorhabditis elegans
WBGene00000627 col-50 T28F2.6 Caenorhabditis elegans
WBGene00000646 H17B01.2 H17B01.2 Caenorhabditis elegans
WBGene00000781 cpr-1 C52E4.1 Caenorhabditis elegans
WBGene00001394 fat-2 W02A2.1 Caenorhabditis elegans
WBGene00001398 fat-6 VZK822L.1 Caenorhabditis elegans
WBGene00001455 flp-12 C05E11.8 Caenorhabditis elegans
WBGene00001752 gst-4 K08F4.7 Caenorhabditis elegans
WBGene00001753 gst-5 R03D7.6 Caenorhabditis elegans
WBGene00001773 gst-25 F37F2.3 Caenorhabditis elegans
WBGene00001792 gst-44 F13A7.10 Caenorhabditis elegans
WBGene00003033 lin-48 F34D10.5 Caenorhabditis elegans
WBGene00003473 mtl-1 K11G9.6 Caenorhabditis elegans
WBGene00003539 nas-20 T11F9.3 Caenorhabditis elegans
WBGene00003572 ncx-7 C07A9.11 Caenorhabditis elegans
WBGene00003664 nhr-74 C27C7.3 Caenorhabditis elegans
WBGene00003995 pgp-1 K08E7.9 Caenorhabditis elegans
WBGene00004007 pgp-13 F22E10.2 Caenorhabditis elegans
WBGene00004326 rde-4 T20G5.11 Caenorhabditis elegans
WBGene00004990 spp-5 T08A9.9 Caenorhabditis elegans
WBGene00006555 tbx-36 ZK829.5 Caenorhabditis elegans
WBGene00006890 vem-1 K07E3.8 Caenorhabditis elegans
WBGene00006930 vit-6 K07H8.6 Caenorhabditis elegans
WBGene00007070 ugt-49 AC3.2 Caenorhabditis elegans
WBGene00007245 cror-1 C01G12.5 Caenorhabditis elegans
WBGene00007459 C08F11.12 C08F11.12 Caenorhabditis elegans
WBGene00007811 C29F7.2 C29F7.2 Caenorhabditis elegans
WBGene00007848 cytb-5.1 C31E10.7 Caenorhabditis elegans
WBGene00007867 C32H11.4 C32H11.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 72-96 hours after L4-adult molt. 6-7 days after first cleavage. 3-days post-L4 adult hermaphrodite Ce WBls:0000066

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
mianserin WBMol:00003509