WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The weight parameters were optimized based on MA-plots such that spike-in controls show their expected fold change values. lmFit function was used to fit a linear model to probe intensities across arrays, and differential expression was calculated by empirical Bayes method using the eBayes function. Control of FDR was employed as correction for multiple testing. Description  Pristionchus pacificus genes up regulated in the dauer versus dauer-exit worms.
Primary Identifier  WBPaper00041207:PP_dauer_up

0 Anatomy Terms

2722 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00089561 PPA00007 PPA00007 Pristionchus pacificus
WBGene00089566 Ppa-coq-4 PPA00012 Pristionchus pacificus
WBGene00089582 PPA00028 PPA00028 Pristionchus pacificus
WBGene00089599 Ppa-pas-6 PPA00045 Pristionchus pacificus
WBGene00089602 PPA00048 PPA00048 Pristionchus pacificus
WBGene00089608 PPA00054 PPA00054 Pristionchus pacificus
WBGene00089685 PPA00131 PPA00131 Pristionchus pacificus
WBGene00089775 PPA00221 PPA00221 Pristionchus pacificus
WBGene00089789 Ppa-cng-1 PPA00235 Pristionchus pacificus
WBGene00089848 PPA00294 PPA00294 Pristionchus pacificus
WBGene00089871 Ppa-agmo-1 PPA00317 Pristionchus pacificus
WBGene00089884 Ppa-rpb-11 PPA00330 Pristionchus pacificus
WBGene00089943 PPA00389 PPA00389 Pristionchus pacificus
WBGene00090014 PPA00460 PPA00460 Pristionchus pacificus
WBGene00090030 PPA00476 PPA00476 Pristionchus pacificus
WBGene00090037 PPA00483 PPA00483 Pristionchus pacificus
WBGene00090048 Ppa-lev-8 PPA00494 Pristionchus pacificus
WBGene00090078 PPA00524 PPA00524 Pristionchus pacificus
WBGene00090085 Ppa-fath-1 PPA00531 Pristionchus pacificus
WBGene00090094 Ppa-rab-1 PPA00540 Pristionchus pacificus
WBGene00090218 Ppa-taf-7.2 PPA00664 Pristionchus pacificus
WBGene00090321 Ppa-col-19 PPA00767 Pristionchus pacificus
WBGene00090382 Ppa-smg-6 PPA00828 Pristionchus pacificus
WBGene00090383 Ppa-vps-50 PPA00829 Pristionchus pacificus
WBGene00090397 Ppa-ung-1 PPA00843 Pristionchus pacificus
WBGene00090408 Ppa-slc-30A9 PPA00854 Pristionchus pacificus
WBGene00090450 PPA00896 PPA00896 Pristionchus pacificus
WBGene00090491 Ppa-sulp-1 PPA00937 Pristionchus pacificus
WBGene00090574 PPA01020 PPA01020 Pristionchus pacificus
WBGene00090599 Ppa-unc-73 PPA01045 Pristionchus pacificus

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  A third stage larva specialized for dispersal and long term survival. dauer larva Ce WBls:0000032

0 Processes

0 Regulated By Gene

0 Regulated By Molecule