WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in MC neuron, MCL, MCR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:MC
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3 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of two marginal cell neuron of the pharynx. MC neuron marginal cell neuron WBbt:0003638
Pharyngeal neurons that synapse onto marginal cells MCL lineage name: ABalpaaappp WBbt:0004463
Pharyngeal neurons that synapse onto marginal cells MCR lineage name: ABarapaappp WBbt:0004461

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000020 abt-2 F12B6.1 Caenorhabditis elegans
WBGene00000049 acr-10 R02E12.8 Caenorhabditis elegans
WBGene00000173 aqp-5 C35A5.1 Caenorhabditis elegans
WBGene00000237 bam-2 Y71F9AR.1 Caenorhabditis elegans
WBGene00000246 bcc-1 M7.3 Caenorhabditis elegans
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans
WBGene00000429 ceh-2 C27A12.5 Caenorhabditis elegans
WBGene00000442 ceh-19 F20D12.6 Caenorhabditis elegans
WBGene00000455 ceh-34 C10G8.6 Caenorhabditis elegans
WBGene00000510 cka-2 C52B9.1 Caenorhabditis elegans
WBGene00000706 col-132 C39E9.9 Caenorhabditis elegans
WBGene00000771 cpb-2 C30B5.3 Caenorhabditis elegans
WBGene00000777 cpn-1 F43G9.9 Caenorhabditis elegans
WBGene00001043 dnj-25 W07A8.3 Caenorhabditis elegans
WBGene00001136 eat-5 F13G3.8 Caenorhabditis elegans
WBGene00001137 eat-6 B0365.3 Caenorhabditis elegans
WBGene00001178 egl-9 F22E12.4 Caenorhabditis elegans
WBGene00001186 egl-18 F55A8.1 Caenorhabditis elegans
WBGene00001210 egl-46 K11G9.4 Caenorhabditis elegans
WBGene00001368 exc-7 F35H8.5 Caenorhabditis elegans
WBGene00001377 eya-1 C49A1.4 Caenorhabditis elegans
WBGene00001402 fbf-2 F21H12.5 Caenorhabditis elegans
WBGene00001618 glr-7 C43H6.9 Caenorhabditis elegans
WBGene00001619 glr-8 F22A3.3 Caenorhabditis elegans
WBGene00001759 gst-11 R11G1.3 Caenorhabditis elegans
WBGene00001804 gur-3 ZC504.5 Caenorhabditis elegans
WBGene00001858 hil-7 C01B10.5 Caenorhabditis elegans
WBGene00001903 his-29 F35H10.11 Caenorhabditis elegans
WBGene00001911 his-37 C50F4.7 Caenorhabditis elegans
WBGene00001915 his-41 C50F4.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule