| Algorithm | Affymetrix TAS software that computed for each probe estimates of fold enrichment (in linear scale) over hybridization with input DNA. At the same time, TAS calculated for each probe a p-value by applying a Wilcoxon signed rank test. A threshold of 2.5 was selected, which corresponds to probe intensities approximately 2.5 times stronger on the ChIP array than on the Input array. Additional TAS threshold parameters were MinRun=180 bp, MaxGap=300 bp. TAS analysis showed that the selected threshold of 2.5 corresponds approximately to a p-value of 0.01. | Description | Potental DAF-12 target genes identified by ChIP-chip analysis performed on strain ALF4 [daf-12 |
| Primary Identifier | WBPaper00040221:DAF-12_target_ALF4 |
| Remark | Definition | Other Name | Public Name | Primary Identifier |
|---|---|---|---|---|
| The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. | L2 larva Ce | WBls:0000027 | ||
| The stage that begins when a C.elegans individual is fully-developed and has reached maturity. | adult Ce | WBls:0000041 |
| WormBase Gene ID | Gene Name | Sequence Name | Organism |
|---|---|---|---|
| WBGene00000908 | daf-12 | F11A1.3 | Caenorhabditis elegans |
