WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Analysis of gene expression data was carried out with the Affymetrix Transcriptome Analysis Console. Data preprocessing (using RMA normalization) and QC metrics were performed using Affymetrix Expression Console TM and manually inspected afterwards. Expression analysis was carried out for each two pairwise conditions. FDR statistical correction for multiple testing resulted in a slightly lower number of DEGs in most cases. P-value < 0.05 and fold change > 2.0 were used to determine differentially expressed genes. Description  Genes from N2 animals with significantly increased expression after 72 hours of treatment on growth media with 250uM allantoin in 2% DMSO.
Primary Identifier  WBPaper00048989:N2_allantoin_upregulated

0 Anatomy Terms

1000 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000008 aat-7 F54D12.3 Caenorhabditis elegans
WBGene00000038 ace-4 Y48B6A.7 Caenorhabditis elegans
WBGene00000059 acr-20 R06A4.10 Caenorhabditis elegans
WBGene00000090 age-1 B0334.8 Caenorhabditis elegans
WBGene00000108 alh-2 K04F1.15 Caenorhabditis elegans
WBGene00000139 amx-3 F25C8.2 Caenorhabditis elegans
WBGene00000143 apc-2 K06H7.6 Caenorhabditis elegans
WBGene00000148 aph-2 ZC434.6 Caenorhabditis elegans
WBGene00000159 aps-1 F29G9.3 Caenorhabditis elegans
WBGene00000196 aars-1 W02B12.6 Caenorhabditis elegans
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
WBGene00000232 avr-14 B0207.12 Caenorhabditis elegans
WBGene00000236 bag-1 F57B10.11 Caenorhabditis elegans
WBGene00000274 btf-1 F15D4.1 Caenorhabditis elegans
WBGene00000402 cdh-10 C45G7.5 Caenorhabditis elegans
WBGene00000407 cdk-5 T27E9.3 Caenorhabditis elegans
WBGene00000417 ced-3 C48D1.2 Caenorhabditis elegans
WBGene00000419 ced-5 C02F4.1 Caenorhabditis elegans
WBGene00000425 ced-11 ZK512.3 Caenorhabditis elegans
WBGene00000427 ced-13 R09F10.9 Caenorhabditis elegans
WBGene00000430 ceh-5 C16C2.1 Caenorhabditis elegans
WBGene00000457 ceh-36 C37E2.4 Caenorhabditis elegans
WBGene00000468 ces-1 F43G9.11 Caenorhabditis elegans
WBGene00000473 cey-2 F46F11.2 Caenorhabditis elegans
WBGene00000474 cey-3 M01E11.5 Caenorhabditis elegans
WBGene00000502 chp-1 Y110A7A.13 Caenorhabditis elegans
WBGene00000511 ckb-1 B0285.8 Caenorhabditis elegans
WBGene00000514 ckb-4 F22F7.5 Caenorhabditis elegans
WBGene00000515 ckc-1 T27A10.3 Caenorhabditis elegans
WBGene00000521 cky-1 C15C8.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 72-96 hours after L4-adult molt. 6-7 days after first cleavage. 3-days post-L4 adult hermaphrodite Ce WBls:0000066

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
allantoin WBMol:00001665