WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in SIADL, SIADR, SIAVL, SIAVR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:SIA
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4 Anatomy Terms

Definition Name Synonym Primary Identifier
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIAVL lineage name: ABplpapappa WBbt:0004985
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIAVR lineage name: ABprpapappa WBbt:0004983
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIADR lineage name: ABprpapaapa WBbt:0004987
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIADL lineage name: ABplpapaapa WBbt:0004989

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000068 acy-1 F17C8.1 Caenorhabditis elegans
WBGene00000149 apl-1 C42D8.8 Caenorhabditis elegans
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans
WBGene00000286 cal-2 C18E9.1 Caenorhabditis elegans
WBGene00000403 casy-1 B0034.3 Caenorhabditis elegans
WBGene00000440 ceh-17 D1007.1 Caenorhabditis elegans
WBGene00000447 ceh-24 F55B12.1 Caenorhabditis elegans
WBGene00000464 ceh-44 Y54F10AM.4 Caenorhabditis elegans
WBGene00000478 cfz-2 F27E11.3 Caenorhabditis elegans
WBGene00000548 clr-1 F56D1.4 Caenorhabditis elegans
WBGene00000552 cmd-1 T21H3.3 Caenorhabditis elegans
WBGene00000952 del-1 E02H4.1 Caenorhabditis elegans
WBGene00000982 dhs-19 T11F9.11 Caenorhabditis elegans
WBGene00001145 eat-16 C16C2.2 Caenorhabditis elegans
WBGene00001163 efn-2 C43F9.8 Caenorhabditis elegans
WBGene00001172 egl-3 C51E3.7 Caenorhabditis elegans
WBGene00001311 end-3 F58E10.5 Caenorhabditis elegans
WBGene00001433 fkb-8 Y18D10A.25 Caenorhabditis elegans
WBGene00001475 fmi-1 F15B9.7 Caenorhabditis elegans
WBGene00001484 fox-1 T07D1.4 Caenorhabditis elegans
WBGene00001502 ftt-2 F52D10.3 Caenorhabditis elegans
WBGene00001588 lgc-56 F09C12.1 Caenorhabditis elegans
WBGene00001670 gpa-8 F56H9.3 Caenorhabditis elegans
WBGene00001671 gpa-9 F56H9.4 Caenorhabditis elegans
WBGene00001682 gpc-2 F08B6.2 Caenorhabditis elegans
WBGene00001745 gsa-1 R06A10.2 Caenorhabditis elegans
WBGene00001858 hil-7 C01B10.5 Caenorhabditis elegans
WBGene00001911 his-37 C50F4.7 Caenorhabditis elegans
WBGene00001915 his-41 C50F4.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule