WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in ADFL, ADFR, AWBL, AWBR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:ADF_AWB
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4 Anatomy Terms

Definition Name Synonym Primary Identifier
Amphid neuron, prob. chemosensory ADFL lineage name: ABalpppppaa WBbt:0004003
Amphid neuron, prob. chemosensory ADFR lineage name: ABpraaappaa WBbt:0003999
Amphid wing cells, neurons having ciliated sheet-like sensory endings closely associated with amphid sheath AWBR lineage name: ABpraaappap WBbt:0003828
Amphid wing cells, neurons having ciliated sheet-like sensory endings closely associated with amphid sheath AWBL lineage name: ABalpppppap WBbt:0003829

299 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000184 arf-6 Y116A8C.12 Caenorhabditis elegans
WBGene00000188 arl-3 F19H8.3 Caenorhabditis elegans
WBGene00000241 bbs-1 Y105E8A.5 Caenorhabditis elegans
WBGene00000242 bbs-2 F20D12.3 Caenorhabditis elegans
WBGene00000244 bbs-8 T25F10.5 Caenorhabditis elegans
WBGene00000451 ceh-30 C33D12.7 Caenorhabditis elegans
WBGene00000462 ceh-41 T26C11.5 Caenorhabditis elegans
WBGene00000468 ces-1 F43G9.11 Caenorhabditis elegans
WBGene00000475 cey-4 Y39A1C.3 Caenorhabditis elegans
WBGene00000484 che-2 F38G1.1 Caenorhabditis elegans
WBGene00000485 che-3 F18C12.1 Caenorhabditis elegans
WBGene00000490 che-11 C27A7.4 Caenorhabditis elegans
WBGene00000492 che-13 F59C6.7 Caenorhabditis elegans
WBGene00000546 clp-6 Y77E11A.10 Caenorhabditis elegans
WBGene00000899 daf-3 F25E2.5 Caenorhabditis elegans
WBGene00000903 daf-7 B0412.2 Caenorhabditis elegans
WBGene00000906 daf-10 F23B2.4 Caenorhabditis elegans
WBGene00000914 daf-19 F33H1.1 Caenorhabditis elegans
WBGene00001043 dnj-25 W07A8.3 Caenorhabditis elegans
WBGene00001092 dro-1 F53A2.5 Caenorhabditis elegans
WBGene00001117 dyf-1 F54C1.5 Caenorhabditis elegans
WBGene00001118 dyf-2 ZK520.3 Caenorhabditis elegans
WBGene00001119 dyf-3 C04C3.5 Caenorhabditis elegans
WBGene00001121 dyf-5 M04C9.5 Caenorhabditis elegans
WBGene00001123 dyf-7 C43C3.3 Caenorhabditis elegans
WBGene00001163 efn-2 C43F9.8 Caenorhabditis elegans
WBGene00001165 efn-4 F56A11.3 Caenorhabditis elegans
WBGene00001207 egl-43 R53.3 Caenorhabditis elegans
WBGene00001210 egl-46 K11G9.4 Caenorhabditis elegans
WBGene00001440 fkh-8 F40H3.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule