WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  To identify DEGs, Students t test and the log2 median ratio test were performed to compute t values and median ratios for all the annotated genes. The adjusted P values from each test were computed using an empirical distribution of the null hypothesis, which was obtained from random permutations of the samples. Finally, the adjusted P values from the individual tests were combined to compute the overall P values using Stouffers method , and genes with overall P < 0.05 and fold change > 1.5 were selected as DEGs. Description  Genes that showed significantly decreased expression in daf-2(e1370) comparing to in N2.
Primary Identifier  WBPaper00047131:daf-2(e1370)_downregulated_N2-background

0 Anatomy Terms

241 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000007 aat-6 T11F9.4 Caenorhabditis elegans
WBGene00000493 che-14 F56H1.1 Caenorhabditis elegans
WBGene00000512 ckb-2 B0285.9 Caenorhabditis elegans
WBGene00000781 cpr-1 C52E4.1 Caenorhabditis elegans
WBGene00000785 cpr-5 W07B8.5 Caenorhabditis elegans
WBGene00000931 dao-5 C25A1.10 Caenorhabditis elegans
WBGene00000988 dhs-25 F09E10.3 Caenorhabditis elegans
WBGene00001164 efn-3 F15A2.5 Caenorhabditis elegans
WBGene00001399 fat-7 F10D2.9 Caenorhabditis elegans
WBGene00001437 fkh-5 F26A1.2 Caenorhabditis elegans
WBGene00001666 gpa-4 T07A9.7 Caenorhabditis elegans
WBGene00001770 gst-22 F21H7.1 Caenorhabditis elegans
WBGene00001795 gtl-1 C05C12.3 Caenorhabditis elegans
WBGene00001941 his-67 T23D8.5 Caenorhabditis elegans
WBGene00002244 laf-1 Y71H2AM.19 Caenorhabditis elegans
WBGene00002827 let-653 C29E6.1 Caenorhabditis elegans
WBGene00003057 lon-3 ZK836.1 Caenorhabditis elegans
WBGene00003094 lys-5 F58B3.2 Caenorhabditis elegans
WBGene00003095 lys-6 F58B3.3 Caenorhabditis elegans
WBGene00003414 mrp-8 Y75B8A.26 Caenorhabditis elegans
WBGene00003511 mxl-3 F46G10.6 Caenorhabditis elegans
WBGene00003571 ncx-6 C07A9.4 Caenorhabditis elegans
WBGene00003572 ncx-7 C07A9.11 Caenorhabditis elegans
WBGene00003583 ndx-6 EEED8.8 Caenorhabditis elegans
WBGene00003877 pept-1 K04E7.2 Caenorhabditis elegans
WBGene00003959 pcp-4 Y116F11B.3 Caenorhabditis elegans
WBGene00004052 parg-2 H23L24.5 Caenorhabditis elegans
WBGene00004196 prx-11 C47B2.8 Caenorhabditis elegans
WBGene00004229 ptr-15 T07H8.6 Caenorhabditis elegans
WBGene00004342 rfs-1 C30A5.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000898 daf-2 Y55D5A.5 Caenorhabditis elegans

0 Regulated By Molecule