WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  For each set of mutant data, the repeats were averaged, and a Z test [Z=(observedexpected)\/SE] was performed in Excel. A moderate correction for multiple testing (~17,600 genes) was performed by multiplying the calculated P-value by 10,000. After this correction, all genes with up- or downregulation greater than twofold, P<0.05 in any given mutant were selected. The hypergeometric probability test was used to calculate the significance of overlap of gene groups. Authors determined whether transcripts of Group I-IV genes are bound by GLD-1, based on a minimum criteria of >1.5 enrichment in GLD-1 immunoprecipitated samples compared to control immunoprecipitations (P < 0.01). Description  Genes with lower expression in efl-1, dpl-1 and lin-35 mutants than in control gonads.
Primary Identifier  WBPaper00027758:Group_II

0 Anatomy Terms

44 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000776 cpl-1 T03E6.7 Caenorhabditis elegans
WBGene00001167 eef-2 F25H5.4 Caenorhabditis elegans
WBGene00001755 gst-7 F11G11.2 Caenorhabditis elegans
WBGene00001881 his-7 F45F2.4 Caenorhabditis elegans
WBGene00001903 his-29 F35H10.11 Caenorhabditis elegans
WBGene00001904 his-30 F35H10.1 Caenorhabditis elegans
WBGene00001905 his-31 F17E9.12 Caenorhabditis elegans
WBGene00001913 his-39 F45F2.2 Caenorhabditis elegans
WBGene00001922 his-48 B0035.8 Caenorhabditis elegans
WBGene00001934 his-60 F55G1.11 Caenorhabditis elegans
WBGene00001940 his-66 H02I12.6 Caenorhabditis elegans
WBGene00002007 hsp-3 C15H9.6 Caenorhabditis elegans
WBGene00002263 lea-1 K08H10.1 Caenorhabditis elegans
WBGene00003963 pdi-2 C07A12.4 Caenorhabditis elegans
WBGene00004056 pmk-2 F42G8.3 Caenorhabditis elegans
WBGene00004241 puf-5 F54C9.8 Caenorhabditis elegans
WBGene00006541 tbh-1 H13N06.6 Caenorhabditis elegans
WBGene00006619 try-1 ZK546.15 Caenorhabditis elegans
WBGene00006959 xbp-1 R74.3 Caenorhabditis elegans
WBGene00007774 C27C12.4 C27C12.4 Caenorhabditis elegans
WBGene00015168 pdi-6 B0403.4 Caenorhabditis elegans
WBGene00015344 nra-4 C02E11.1 Caenorhabditis elegans
WBGene00015899 C17E7.4 C17E7.4 Caenorhabditis elegans
WBGene00016534 C39D10.7 C39D10.7 Caenorhabditis elegans
WBGene00017648 ddo-3 F20H11.5 Caenorhabditis elegans
WBGene00018271 ctsa-1.1 F41C3.5 Caenorhabditis elegans
WBGene00018604 uggt-1 F48E3.3 Caenorhabditis elegans
WBGene00018605 try-14 F48E3.4 Caenorhabditis elegans
WBGene00020199 metl-9 T03G11.6 Caenorhabditis elegans
WBGene00021153 Y4C6A.3 Y4C6A.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

3 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001061 dpl-1 T23G7.1 Caenorhabditis elegans
WBGene00001161 efl-1 Y102A5C.18 Caenorhabditis elegans
WBGene00003020 lin-35 C32F10.2 Caenorhabditis elegans

0 Regulated By Molecule