WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq was used. Fold change between the average of the four control replicates and the average of the four test replicates was used to calculate the significance using a negative binomial distribution. An adjusted P-value was calculated using the Benjamini-Hochberg method for multiple testing correction. Description  mRNAs that showed decreased expression in csr-1(RNAi) animales comparing to in control RNAi animals. Set 1 transcripts were defined as adjusted p-value < 0.05 and fold change > 2.6.
Primary Identifier  WBPaper00046805:csr-1(RNAi)_downregulated_Set2

0 Anatomy Terms

166 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000031 abu-8 C03A7.14 Caenorhabditis elegans
WBGene00000034 abu-11 T01D1.6 Caenorhabditis elegans
WBGene00000170 aqp-2 C01G6.1 Caenorhabditis elegans
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans
WBGene00000469 ces-2 ZK909.4 Caenorhabditis elegans
WBGene00000738 col-165 F14H12.1 Caenorhabditis elegans
WBGene00000930 dao-4 ZC373.6 Caenorhabditis elegans
WBGene00001064 dpy-2 T14B4.6 Caenorhabditis elegans
WBGene00001075 dpy-14 H27M09.4 Caenorhabditis elegans
WBGene00001089 dre-1 K04A8.6 Caenorhabditis elegans
WBGene00001178 egl-9 F22E12.4 Caenorhabditis elegans
WBGene00001249 elt-1 W09C2.1 Caenorhabditis elegans
WBGene00001430 fkb-5 C50F2.6 Caenorhabditis elegans
WBGene00001470 baz-2 ZK783.4 Caenorhabditis elegans
WBGene00001490 frm-3 H05G16.1 Caenorhabditis elegans
WBGene00001493 frm-7 C51F7.1 Caenorhabditis elegans
WBGene00001637 gly-12 F48E3.1 Caenorhabditis elegans
WBGene00001716 grl-7 T02E9.2 Caenorhabditis elegans
WBGene00001780 gst-32 Y53F4B.37 Caenorhabditis elegans
WBGene00001811 haf-1 C30H6.6 Caenorhabditis elegans
WBGene00001817 haf-7 Y50E8A.16 Caenorhabditis elegans
WBGene00001828 hch-1 F40E10.1 Caenorhabditis elegans
WBGene00002216 klp-3 T09A5.2 Caenorhabditis elegans
WBGene00002827 let-653 C29E6.1 Caenorhabditis elegans
WBGene00003024 lin-39 C07H6.7 Caenorhabditis elegans
WBGene00003068 lrk-1 T27C10.6 Caenorhabditis elegans
WBGene00003374 mlk-1 K11D12.10 Caenorhabditis elegans
WBGene00003603 nhr-4 F32B6.1 Caenorhabditis elegans
WBGene00003616 nhr-17 C02B4.2 Caenorhabditis elegans
WBGene00003620 nhr-21 F21D12.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017641 csr-1 F20D12.1 Caenorhabditis elegans

0 Regulated By Molecule