WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The threshold for the detected proteins and matched peptides was set at sequence coverage >= 20% and ProteinPilot unused score >= 1.31 (a confidence threshold of 95%). Theoretical pI and Mw of each identified protein were calculated by using the pI/Mw tool of the ExPASy proteomic server (Swiss Institute of Bioinformatics, Lausanne, Switzerland). Description  Proteins constantly downregulated in pgl-1(bn101) and pgl-1(ct131) at both 20 C and 25 C, according to 2D-DIGE and LC-MS/MS.
Primary Identifier  WBPaper00041097:pgl-1_downregulated

0 Anatomy Terms

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001744 gars-1 T10F2.1 Caenorhabditis elegans
WBGene00002005 hsp-1 F26D10.3 Caenorhabditis elegans
WBGene00004302 ran-1 K01G5.4 Caenorhabditis elegans
WBGene00004469 rpsa-1 B0393.1 Caenorhabditis elegans
WBGene00006537 tbb-2 C36E8.5 Caenorhabditis elegans
WBGene00008920 eef-1G F17C11.9 Caenorhabditis elegans
WBGene00010556 rack-1 K04D7.1 Caenorhabditis elegans
WBGene00018811 pmt-2 F54D11.1 Caenorhabditis elegans
WBGene00020812 acdh-7 T25G12.5 Caenorhabditis elegans
WBGene00010266 dct-18 F58G1.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003992 pgl-1 ZK381.4 Caenorhabditis elegans

0 Regulated By Molecule