WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Statistical analysis was based on t-test for independent samples via SPSS to compare each of the nicotine treatments with control (i.e. low vs. control and high vs. control). Welch test correction was performed to account for unequal variance in each of the compared groups (control and treatment). In addition, to increase the statistical stringency, miRNAs differential expression was deemed significant only if it fulfilled two criteria: p value , 0.05 and expression changed by at least 50% relative to control. Description  miRNAs in F1 generation down regulated by exposure to 20uM and 20mM nicotine during F0 generation.
Primary Identifier  WBPaper00049006:nicotine_downregulated_F1

0 Anatomy Terms

13 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003284 mir-56 F09A5.8 Caenorhabditis elegans
WBGene00003299 mir-71 F16A11.4 Caenorhabditis elegans
WBGene00045328 mir-794 T07D10.7 Caenorhabditis elegans
WBGene00003269 mir-41 Y62F5A.8 Caenorhabditis elegans
WBGene00003270 mir-42 ZK930.8 Caenorhabditis elegans
WBGene00003281 mir-53 F36H1.8 Caenorhabditis elegans
WBGene00003349 mir-255 F08F3.11 Caenorhabditis elegans
WBGene00003347 mir-253 F44E7.11 Caenorhabditis elegans
WBGene00045342 mir-785 Y41G9A.11 Caenorhabditis elegans
WBGene00045343 mir-786 C39D10.12 Caenorhabditis elegans
WBGene00077706 mir-1829.2 F20D1.11 Caenorhabditis elegans
WBGene00077707 mir-1829.3 F39B1.2 Caenorhabditis elegans
WBGene00077705 mir-1829.1 K09A9.7 Caenorhabditis elegans

0 Life Stages

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
nicotine WBMol:00001980