WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00088517 Phenotype Remark  cdt-1 RNAi embryos arrest with approximately 60 cells and contain only trace amounts of DNA, indicating a virtually complete cessation of DNA replication, although early cell divisions occur. Unequal DNA segregation and DNA bridges between dividing cells are observed during these early cell divisions, presumably secondary consequences of the defective DNA replication.
Remark  paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. yk10c5 was used by authors.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000413 cdt-1 Y54E10A.15 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10A.15 Y54E10A.15 2055   I: 3223619-3223790

1 Laboratories

Primary Identifier
ET

3 Phenotype

Identifier Name Description
WBPhenotype:0000867 embryonic arrest Cessation of development during any stage occurring after fertilization and until hatching compared to control.
WBPhenotype:0000773 chromosome segregation variant Any variation in the processes that regulate the apportionment of chromosomes to each of two daughter cells compared to control.
WBPhenotype:0000433 DNA synthesis variant Variations in the processes involving the production of new DNA strands compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005912

1 Strain

WormBase ID
WBStrain00000001