WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077150 Genotype  PIE-1::GFP
Phenotype Remark  failed to gastrulate

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000410 cdk-9 H25P06.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H25P06.2a H25P06.2a 1338   I: 11323532-11323581
CDS:H25P06.2b H25P06.2b 1437   I: 11323532-11323581

1 Laboratories

Primary Identifier
LD

3 Phenotype

Identifier Name Description
WBPhenotype:0000867 embryonic arrest Cessation of development during any stage occurring after fertilization and until hatching compared to control.
WBPhenotype:0000047 gastrulation variant Variations in the process by which the germ layers become positioned in an embryo compared to control animals. Gastrulation involves the proper ingression of small groups of cells at various times into the blastocoel space.
WBPhenotype:0000834 E lineage variant The descendants of the E blastomere exhibit altered developmental programs compared to their counterparts in control animals.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000436 protein subcellular localization variant Any variation in the placement of a protein within in a cell or cellular compartment compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005411

0 Strain