WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00061092 Phenotype Remark  decreased fertility in males

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001177 egl-8 B0348.4 Caenorhabditis elegans

25 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0348.4b B0348.4b 4296   V: 21007-21090
CDS:B0348.4f B0348.4f 4221   V: 21007-21090
CDS:B0348.4h B0348.4h 3978   V: 21007-21090
CDS:B0348.4j B0348.4j 4041   V: 21007-21090
CDS:B0348.4k B0348.4k 4005   V: 21007-21090
CDS:B0348.4m B0348.4m 3762   V: 21007-21090
CDS:B0348.4n B0348.4n 4455   V: 21007-21090
CDS:B0348.4u B0348.4u 3858   V: 21007-21090
CDS:B0348.4v B0348.4v 3957   V: 21007-21090
CDS:B0348.4r B0348.4r 4137   V: 21007-21090
CDS:B0348.4t B0348.4t 3894   V: 21007-21090
CDS:B0348.4x B0348.4x 3714   V: 21007-21090
CDS:B0348.4e B0348.4e 4503   V: 21007-21090
CDS:B0348.4d B0348.4d 4539   V: 21007-21090
CDS:B0348.4a B0348.4a 4260   V: 21007-21090
CDS:B0348.4c B0348.4c 1779   V: 21007-21090
CDS:B0348.4g B0348.4g 4185   V: 21007-21090
CDS:B0348.4i B0348.4i 3942   V: 21007-21090
CDS:B0348.4l B0348.4l 3798   V: 21007-21090
CDS:B0348.4o B0348.4o 4419   V: 21007-21090
CDS:B0348.4p B0348.4p 4212   V: 21007-21090
CDS:B0348.4q B0348.4q 4176   V: 21007-21090
CDS:B0348.4s B0348.4s 4101   V: 21007-21090
CDS:B0348.4w B0348.4w 3921   V: 21007-21090
CDS:B0348.4y B0348.4y 3678   V: 21007-21090

1 Laboratories

Primary Identifier
HB

4 Phenotype

Identifier Name Description
WBPhenotype:0000145 fertility phenotype Animals exhibit variations in the time of onset or duration of the fertile period, or production of new individuals that contain some portion of their genetic material inherited from that organism compared to control.
WBPhenotype:0000279 spicule insertion defective Males exhibit defects in the insertion of the male copulatory spicules into the mating partner. In C. elegan spicule insertion behavior initiates when the male cloaca contacts the vulva. During most mating encounters, the spicule tips will prod the vulva continuously until they partially penetrate, which then causes the protractors to contract completely so that the spicules extend through the vulva.
WBPhenotype:0000284 sperm transfer defective Any defect in the process whereby a male inseminates his partner by introducing sperm into the genital tract.
WBPhenotype:0000421 levamisole resistant Animals fail to respond to the concentration of levamisole that elicits a response in control animals. Alternatively, animals require increased concentration or longer exposure to this compound to elicit the response compared to control animals. In C. elegans resistance to levamisole is often assayed via body contraction response, ventral tail curling response etc.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026608

1 Strain

WormBase ID
WBStrain00004346