WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00064285 Phenotype Remark  size of gonad reduced

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000231 atx-2 D2045.1 Caenorhabditis elegans
WBGene00008423 D2045.5 D2045.5 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2045.1d D2045.1d 3213   III: 10461389-10461724
CDS:D2045.1a D2045.1a 2889   III: 10461713-10461724
CDS:D2045.1b D2045.1b 1905   III: 10464464-10464815
CDS:D2045.1c D2045.1c 2802   III: 10461713-10461724
CDS:D2045.5 D2045.5 1056   III: 10468107-10468678

1 Laboratories

Primary Identifier
JJ

2 Phenotype

Identifier Name Description
WBPhenotype:0000683 masculinization of germline The germ line is sexually transformed from hermaphrodite to male. In C. elegans, XX mog animals are somatically hermaphrodite, but germ cells that normally would become oocytes are transformed into sperm.
WBPhenotype:0000605 reproductive system morphology variant Any variations in the form, structure or composition of a set of interacting or interdependent entities forming the reproductive system, compared to control. The reproductive system is involved in the generation of progeny which contain genetic material inherited from the parents.

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001206 movement variant Variations in the process by which an organism travels from one location to another compared to control.
WBPhenotype:0000231 body size variant Animals exhibit variations in the physical dimensions of its body compared to control animals of the same developmental stage.
WBPhenotype:0001587 actin organization biogenesis phenotype Animals exhibit variations in the formation and/or arrangement of actin, an abundant cytoskeletal protein in most cells, often linked to the plasma membrane and concentrated at cell junctions compared to control (Wormatlas).
WBPhenotype:0001016 larval growth variant Variations in the processes that regulate the change (increase) in size or mass of an integrated living unit (a cell, tissue, organ or organism) during the larval stages compared to control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024364

0 Strain