WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00089501 Phenotype Remark  The tails of utx-1 RNAi animals appear as blobs or forks, instead of the normal, smooth whip shape as in wild type animals. In general, the posterior portion of the body appears deformed.
Remark  (Figure 2A-C, S8) utx-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017046 utx-1 D2021.1 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2021.1b D2021.1b 3426   X: 8557180-8557245
CDS:D2021.1a D2021.1a 3441   X: 8557180-8557245

1 Laboratories

Primary Identifier
ZR

5 Phenotype

Identifier Name Description
WBPhenotype:0001355 gonad morphology variant Variations in the form or composition of a specialized tissue of the reproductive tract that produces the male or female gametes compared to control (Wormatlas).
WBPhenotype:0000073 tail morphology variant Animals exhibit variations in the form, structure or composition of any portion of the most posterior region of the body compared to control. The anterior bound of the tail is not well defined though it might range from the position of the post-deirids to the opening of the anus (Wormatlas).
WBPhenotype:0000690 gonad migration variant Variations in the gross movement of the whole structure of the gonad along the body wall, behind the gonadal leader cell and away from the developing vulva compared to control (Wormatlas).
WBPhenotype:0001925 oocytes disorganized Oocytes are no longer arranged in the gonad in the same manner as control animals.
WBPhenotype:0000793 posterior body morphology variant Animals exhibit variations in the form, structure or composition of the anatomy contained in the posterior region, compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041072

0 Strain