WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00102712 Phenotype Remark  Authors report an increase in lipid droplet size as well as growth rate variant, increased fat content, and sterile phenotypes (see Table 3 in paper) in response to sams-1 RNAi
Remark  (Table 3, Figure 4, 5) sams-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008205 sams-1 C49F5.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49F5.1 C49F5.1 1212   X: 11966028-11966096

1 Laboratories

Primary Identifier
LIB

4 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000676 growth rate variant The increase in size or mass of an organism over time during the lifespan of the organism or over any developmental stage(s) is not similar to that observed for control animals.
WBPhenotype:0001184 fat content increased Animals exhibit a greater amount of fat or lipids than observed in control animals.
WBPhenotype:0001902 fat associated body size increased Animals exhibit an increase in the size of fat containing organelles compared to control. In C. elegans this can be assayed by BODIPY 493/503 staining.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00042257

0 Strain