WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00093855 Phenotype Remark  Exonuclease activity for miRNA decay depended on XRN-2, because miRNA degradation was impaired with xrn-2(RNAi) but not xrn-1(RNAi) lysates.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006964 xrn-2 Y48B6A.3 Caenorhabditis elegans
WBGene00220169 Y48B6A.25 Y48B6A.25 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48B6A.3 Y48B6A.3 2928   II: 14155787-14156074

1 Laboratories

Primary Identifier
HW

2 Phenotype

Identifier Name Description
WBPhenotype:0000727 enzyme activity variant Any variation in the function of naturally occurring macromolecular substances known as enzymes compared to control. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein (can include an RNA component).
WBPhenotype:0000028 RNA processing variant Variations in the processes involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035168

0 Strain