WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097137 Phenotype Remark  Animals treated at later larval stages (L2 and L3), thus with reduced exposure to crn-1(RNAi), had many surviving progeny (data not shown). These viable, crn-1(RNAi)-treated embryos accumulated TUNEL-positive nuclei throughout embryonic development, indicating an increase in apoptosis.
Remark  (Figure 1B) crn-1 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000794 crn-1 Y47G6A.8 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.8 Y47G6A.8 1149   I: 3482030-3482119

1 Laboratories

Primary Identifier
CU

2 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000183 apoptosis increased Any perturbation that causes an elevation in the frequency of cell death by apoptosis compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005978

1 Strain

WormBase ID
WBStrain00000001