WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00111983 Phenotype Remark  RNAi of nlg-1showed a significant decrease in the response to gentle touch.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation (C40C9.5a).

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006412 nlg-1 C40C9.5 Caenorhabditis elegans

9 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C40C9.5f C40C9.5f 2397   X: 13625690-13625735
CDS:C40C9.5c C40C9.5c 2385   X: 13626618-13626761
CDS:C40C9.5a C40C9.5a 2397   X: 13625690-13625744
CDS:C40C9.5b C40C9.5b 2388   X: 13625690-13625735
CDS:C40C9.5d C40C9.5d 2292   X: 13625690-13625744
CDS:C40C9.5e C40C9.5e 2544   X: 13625690-13625744
CDS:C40C9.5g C40C9.5g 2406   X: 13625690-13625744
CDS:C40C9.5h C40C9.5h 1269   X: 13625690-13625735
CDS:C40C9.5i C40C9.5i 1278   X: 13625690-13625744

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000398 light body touch resistant Animals do not respond to stroking to the head or tail with a hair or similar fiber, but does respond to stronger mechanical stimuli such as prodding with a fine platinum wire or similar tool compared to controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041217

1 Strain

WormBase ID
WBStrain00000001