WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00103806 Genotype  unc-129 promoter::unc-116 RNAi
Phenotype Remark  Cell-specific unc-116 RNAi in neurons caused a low, but significant axonal accumulation of a lysosomal marker (Figure S3C). Authors state that reducing the function of UNC-116 causes cell autonomous axonal organelle accumulation. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006840 unc-116 R05D3.7 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D3.7 R05D3.7 2448   III: 8351807-8351811

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0001344 organelle organization biogenesis variant Intracellular membrane bound compartments vary in shape or size from that observed in control animals.
WBPhenotype:0002103 lysosome localization variant Any variation in the subcellular localization of membrane bound organelles, known as lysosomes, that have an acidic interior and generally act to digest components of the cell, compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041921

0 Strain