WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00111155 Phenotype Remark  RNAi of this gene caused a weak increase in specific isoforms of tos-1 compared to control animals, but did not cause recognition of the cryptic 3-prime splice site of intron 1.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006698 uaf-2 Y116A8C.35 Caenorhabditis elegans
WBGene00045155 Y116A8C.50 Y116A8C.50 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116A8C.35a Y116A8C.35a 858   IV: 17116887-17117316

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001807 alternative splicing variant Any variation in the process of generating multiple mRNA molecules from a given set of exons by differential use of exons from the primary transcript(s) to form multiple mature mRNAs that vary in their exon composition compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040388

0 Strain