WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00116334 Phenotype Remark  Centriole duplication does not occur in sas-5(RNAi) embryos, leading to monopolar spindle assembly in each blastomere at the second cell cycle. As a result, a four-cell configuration is never observed.
Remark  Exact sequence used for RNAi not stated by authors, genomic sequence of gene used for curation. Authors state their RNAi targets nucleotides 301 through 1170 of the genomic sequence.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009385 sas-5 F35B12.5 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35B12.5c F35B12.5c 867   V: 11611222-11611402
CDS:F35B12.5a F35B12.5a 1215   V: 11610779-11610830

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001876 centriole biogenesis variant Any variation in the formation or disassembly of the cylindrical structures that are composed of groupings of microtubules found close to the nucleus (centrioles) compared to control. Centrioles are arranged perpendicularly and are surrounded by an amorphous mass of dense material (the pericentriolar material). The centrioles and the pericentriolar material constitute the compound structure known as the centrosome.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00046872

0 Strain