WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00114840 Phenotype Remark  ERM-1 is required for the assembly of the F-actin cytoskeleton in the apical cell cortex of the intestine.The primary defect we observe in erm-1(RNAi) embryos is the loss of F-actin accumulation in the apical cell cortex.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors did state they used the following clones to create transcribe dsRNAs for this experiment: yk129b2, yk257f5.
Paste the following link
Lists
This RNAi isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001333 erm-1 C01G8.5 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G8.5a C01G8.5a 1692   I: 5284598-5284690
CDS:C01G8.5b C01G8.5b 1695   I: 5284598-5284690

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001587 actin organization biogenesis phenotype Animals exhibit variations in the formation and/or arrangement of actin, an abundant cytoskeletal protein in most cells, often linked to the plasma membrane and concentrated at cell junctions compared to control (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024261

0 Strain