WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00091565 Phenotype Remark  In apr-1(RNAi) embryos, the founder E cell adopts an MS-like fate
Remark  (Table 1, Text) apr-1 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000156 apr-1 K04G2.8 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04G2.8a K04G2.8a 3561   I: 8050043-8050225
CDS:K04G2.8b K04G2.8b 3567   I: 8050043-8050225
CDS:K04G2.8c K04G2.8c 2679   I: 8050043-8050225

1 Laboratories

Primary Identifier
WM

5 Phenotype

Identifier Name Description
WBPhenotype:0000414 cell fate transformation The cell takes on a different identity from which it was initially committed.
WBPhenotype:0001635 excess pharyngeal cells Animals contain an excess number of pharyngeal cells compared to control. In C. elegans, pharyngeal cells are derived from MS-blastomere. The overproduction of pharyngeal tissues is a result of other blastomeres adopting an MS-like fate.
WBPhenotype:0001495 cell division precocious Cells divide at an earlier stage of development compared to control animals.
WBPhenotype:0000472 endoderm absent Animals lack the early blast cells that give rise to the gut tissue (Wormatlas).
WBPhenotype:0000834 E lineage variant The descendants of the E blastomere exhibit altered developmental programs compared to their counterparts in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00002871

0 Strain