WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00063785 Phenotype Remark  gonad sheath cell structure abnormal

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006771 tln-1 Y71G12B.11 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12B.11a Y71G12B.11a 7662   I: 1721597-1721729
CDS:Y71G12B.11e Y71G12B.11e 6567   I: 1726686-1727126
CDS:Y71G12B.11c Y71G12B.11c 5673   I: 1729895-1730055
CDS:Y71G12B.11d Y71G12B.11d 4536   I: 1734592-1738527

1 Laboratories

Primary Identifier
JE

7 Phenotype

Identifier Name Description
WBPhenotype:0000691 gonad development variant Variations in the progression of the organ that produces gametes over time, from its formation to the mature structure compared to control.
WBPhenotype:0000473 progressive paralysis Animals become increasingly sluggish/immobilized as they age.
WBPhenotype:0000195 distal tip cell migration variant Variations in the migration pattern of distal tip cells compared to control animals. In C. elegans, DTCs located on the anterior and posterior ends of the gonad primordium typically migrate in a symmetrical U-shaped pattern.
WBPhenotype:0000666 ovulation variant Any variation that disrupts the release of a mature oocyte into the spermatheca (for subsequent fertilization), compared to control.
WBPhenotype:0000904 muscle cell morphology variant Any variation in the morphological appearance of muscle cells compared to control animals.
WBPhenotype:0000812 germ cell development variant Variations in the progression of the immature germ cell over time, from its formation from precursors to the mature structure (gamete) compared to control.
WBPhenotype:0000605 reproductive system morphology variant Any variations in the form, structure or composition of a set of interacting or interdependent entities forming the reproductive system, compared to control. The reproductive system is involved in the generation of progeny which contain genetic material inherited from the parents.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00006281

1 Strain

WormBase ID
WBStrain00000001