WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077094 Phenotype Remark  reduction in hypodermal ploidy

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007103 crm-1 B0024.14 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0024.14a B0024.14a 2703   V: 10322569-10322668
CDS:B0024.14d B0024.14d 2715   V: 10322569-10322668
CDS:B0024.14b B0024.14b 2901   V: 10322569-10322668
CDS:B0024.14f B0024.14f 2628   V: 10322569-10322668

1 Laboratories

Primary Identifier
KC

2 Phenotype

Identifier Name Description
WBPhenotype:0000229 small Animals are shorter and thinner than control animals at the same developmental stage.
WBPhenotype:0000735 endoreduplication of hypodermal nuclei variant Any variation in the regulated re-replication of DNA in the hypodermal cells during a single cell cycle, compared to control.

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000505 male ray morphology variant Animals exhibit variations in the structure or organization of any of the finger-like sensory sensilla that project from the tail and embed in the male fan compared to control animals. In C. elegans, nine bilateral rays project from the tail in a radial pattern with a smooth and slightly tapered appearance. Although one neuronal member of each ray sensillum is exposed to the outside, male rays rarely take up dye.
WBPhenotype:0000443 spicule morphology variant Any variation in the appearance of the elongated sclerotized structures covered by a hardened layer of cuticle in the male tail (which are actively everted during copulation to fasten the male copulatory fan to the vulva) compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031016

0 Strain