WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00083039 Phenotype Remark  Soma to germline transformations. PGL-1 protein ectopically in all intestinal cells and in many hypodermal cells (also shown by ectopic expression of GLH-2, and GLH-3). The ectopic PGL-1 accumulates in perinuclear structures as does PGL-1 in the germline cells.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003218 mep-1 M04B2.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M04B2.1 M04B2.1 2613   IV: 11524643-11524765

1 Laboratories

Primary Identifier
WM

3 Phenotype

Identifier Name Description
WBPhenotype:0000354 cell differentiation variant Variations in the processes leading to the specialization of cell. Differentiation impacts diverse cellular properties such as size, shape, polarity, gene expression and responsiveness to signals/cues.
WBPhenotype:0000414 cell fate transformation The cell takes on a different identity from which it was initially committed.
WBPhenotype:0001302 P granule localization defective The restricted localization of P granules to germ cells or germ cell precursors is altered compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005605

0 Strain