WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086650 Phenotype Remark  Approximately 50% of puf-9(RNAi) worms exhibit incomplete seam cell fusion

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004245 puf-9 W06B11.2 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06B11.2 W06B11.2 2112   X: 5841617-5841665

1 Laboratories

Primary Identifier
CT

3 Phenotype

Identifier Name Description
WBPhenotype:0000280 breaks in alae The small linear ridges running along the lateral lines of the cuticle, lengthwise along the body, contain gaps as opposed to a continuous arrangement (Wormatlas).
WBPhenotype:0000511 nuclear positioning variant Variations in the directed movement of the nucleus to a specific location within a cell compared to control.
WBPhenotype:0000166 seam cell fusion variant Variations in the ability of seam cells to fuse to form a continuous syncytium along the body wall late larval development, (separate from the hyp 7 syncytium), compared to control (WormAtlas). Hypodermal seam cells lie along the lateral body wall to form longitudinal stripes of epithelial cells underlying the alae, and are required for alae formation.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029255

1 Strain

WormBase ID
WBStrain00000001