WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077725 Phenotype Remark  Phosphatase activity decreased. Diminished phosphatase activity as measured with phosphatidylinositol 3-phosphate (PI3P) as a substrate. Observed a twofold increase in the PI3P contents in the RNAi treated worms.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003476 mtm-3 T24A11.1 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24A11.1a T24A11.1a 3021   III: 3790825-3790838
CDS:T24A11.1b T24A11.1b 2886   III: 3790613-3790838

0 Laboratories

6 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000646 sluggish Animals move more slowly compared with control animals.
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000124 enzyme activity reduced Any variation that results in a decrease in the catalytic activity of an enzyme compared to control. Catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein (can include an RNA component).
WBPhenotype:0001171 shortened life span The duration of viability in the adult phase of the life-cycle is less than that of control animals.
WBPhenotype:0000007 bag of worms A worm carcass is formed with retained eggs that hatch inside.

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000518 development phenotype Variations in the progression of an integrated living unit (a cell, tissue, organ or organism) over time from an initial condition to a later condition compared to control animals.
WBPhenotype:0000231 body size variant Animals exhibit variations in the physical dimensions of its body compared to control animals of the same developmental stage.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031664

1 Strain

WormBase ID
WBStrain00000001