WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00065966 Phenotype Remark  in wip -1 RNAi-treated embryos, the hypodermal cells distorted to the periphery of the embryo without covering the entire body (disrupted ventral closure)

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020094 wip-1 R144.4 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R144.4a R144.4a 1083   III: 5018648-5018758
CDS:R144.4b R144.4b 1089   III: 5018648-5018758

1 Laboratories

Primary Identifier
BD

3 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000594 cell migration variant Any variation in the orderly movement of a cell from one site to another.
WBPhenotype:0000189 hypodermis disorganized Hypodermal cells fail to be organized in the same manner as observed in control animals. In C. elegans, hypodermal cells typically organize into distinct dorsal, lateral and ventral rows and cover the entire body.

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000707 pharyngeal development variant Variations in the progression of the pharynx (feeding organ) over time, from its formation to the mature structure compared to control. In C. elegans the pharynx is divided into the anterior and posterior regions. The anterior region includes the corpus (procorpus and metacorpus - first bulb) and the posterior region includes the isthmus and terminal bulb (second bulb).
WBPhenotype:0000708 intestinal development variant Variations in the progression of the intestine over time from its initial formation to its mature structure compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027006

1 Strain

WormBase ID
WBStrain00034582