WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00036090 Phenotype Remark  penetrance is less than 90%
Remark  bacterial-feeding RNAi began at the L1 larval stage Secondary Identifier  MV_SV:mv_T28F12.2a

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006796 unc-62 T28F12.2 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F12.2a T28F12.2a 1695   V: 4497467-4497589
CDS:T28F12.2f T28F12.2f 1683   V: 4497467-4497589
CDS:T28F12.2b T28F12.2b 1584   V: 4499796-4499807
CDS:T28F12.2e T28F12.2e 1572   V: 4499796-4499807
CDS:T28F12.2g T28F12.2g 1473   V: 4501318-4501400
CDS:T28F12.2d T28F12.2d 336   V: 4509913-4510148
CDS:T28F12.2c T28F12.2c 462   V: 4505814-4505905
CDS:T28F12.2h T28F12.2h 1461   V: 4501318-4501400

2 Laboratories

Primary Identifier
MV
SV

5 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000697 protruding vulva Animals undergo incomplete vulval morphogenesis, resulting in the formation of a single protrusion at the site of the vulva.
WBPhenotype:0000186 oogenesis variant Any aberrancy in the processes that influence the generation and maturation of oocytes compared to control animals.
WBPhenotype:0000640 egg laying variant Animals exhibit variations in the stage of eggs laid, egg laying cycle, number of eggs or egg laying in response to stimuli compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024497

0 Strain