WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087277 Phenotype Remark  mRNA levels of sod-3, ech-1 (substantially), daf-16 and fasn-1 (modestly) increased upon fat-2(RNAi), as determined by RT-PCR

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001394 fat-2 W02A2.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02A2.1a W02A2.1a 1131   IV: 13323880-13324530

0 Laboratories

9 Phenotype

Identifier Name Description
WBPhenotype:0000351 failure to hatch Animals fail to emerge from an egg shell.
WBPhenotype:0000137 mRNA levels reduced Animals exhibit decreased levels of messenger RNA compared to control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000136 mRNA levels increased Animals exhibit elevated levels of messenger RNA compared to control.
WBPhenotype:0000640 egg laying variant Animals exhibit variations in the stage of eggs laid, egg laying cycle, number of eggs or egg laying in response to stimuli compared to control.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0001213 locomotion reduced Animals exhibit a decrease in any parameter used to measure locomotion compared to control animals.
WBPhenotype:0001905 fewer eggs laid Animals lay fewer total number of eggs over the lifetime of the animal.
WBPhenotype:0000373 egg shape variable The overall structure or appearance of fertilized oocytes that are laid exhibit nonconsistent and significant deviation from that of control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031804

0 Strain