WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00103033 Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004886 smi-1 Y39A3CR.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3CR.1a Y39A3CR.1a 765   III: 1878373-1878606
CDS:Y39A3CR.1c Y39A3CR.1c 432   III: 1879319-1879372
CDS:Y39A3CR.1d Y39A3CR.1d 456   III: 1879319-1879372
CDS:Y39A3CR.1b Y39A3CR.1b 741   III: 1878373-1878606

1 Laboratories

Primary Identifier
LM

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000695 vulva morphology variant Animals exhibit variations in the gross structure or organization of the reproductive organ required for depositing eggs and for influencing male mating behavior compared to control.
WBPhenotype:0000644 paralyzed Animals do not move and are not responsive to external mechanical stimulation.
WBPhenotype:0000638 molt defect Animals exhibit defects in the process of periodic shedding, of part or all of its cuticle, during cuticle replacement that punctuates each larval stage.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028478

0 Strain