WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00085280 Phenotype Remark  rack-1(RNAi) disrupted the proper pathfinding of the VD and DD commissural axons. Specific defects include - axon misguidance, branching and premature termination.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation (K04D7.1.1).

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010556 rack-1 K04D7.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04D7.1 K04D7.1 978   IV: 10176710-10176824

1 Laboratories

Primary Identifier
LE

3 Phenotype

Identifier Name Description
WBPhenotype:0001224 axon outgrowth variant Any variation in the processes that govern the extension of axons compared to control.
WBPhenotype:0000384 axon guidance variant Variations in the cue-directed extension of an axon towards a specific target site compared to control. (Axon guidance often depends on a combination of attractive and repulsive cues).
WBPhenotype:0000633 axon branching variant Animals display variations in the number or pattern of axonal tracts stemming from the neuron cell body, compared to that observed in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00037834

0 Strain