WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00092472 Phenotype Remark  22% of AB cells and 22% of P1 cells in the air-1 RNAi 2-cell embryo exhibited small spindles. Spindles were designated as "small" if they had smaller centrosomes and/or shorter microtubules (microtubules do not reach the cell cortex) as compared to wild-type spindles at similar stages of the cell cycle
Remark  (Table 2) air-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000098 air-1 K07C11.2 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07C11.2 K07C11.2 981   V: 8221501-8221551

1 Laboratories

Primary Identifier
AG

6 Phenotype

Identifier Name Description
WBPhenotype:0001106 spindle orientation variant AB or P1 early emb The orientation of the spindle is aberrant in either the AB or the P1 cell.
WBPhenotype:0001588 microtubule organization biogenesis variant Animals exhibit variations in the form, structure, composition or arrangement of a robust macromolecular array, composed primarily of tubulin, which forms long extended cytoskeletal elements compared to control (Wormatlas).
WBPhenotype:0000628 spindle assembly defective early emb Early embryos exhibit defects in the aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.
WBPhenotype:0001903 centrosome biogenesis variant Animals exhibit variations in the formation, maturation or disassembly of the centrosome (a subcellular body consisting of two centrioles embedded in a protein matrix). The centrosome serves as a microtubule organizing center as well as a regulator of cell-cycle progression.
WBPhenotype:0000759 spindle defective early emb Early embryos exhibit defects in the assembly, disassembly, arrangement, elongation or stabilization of the microtubules and associated molecules that form between opposite poles of a eukaryotic cell during a cell cycle.
WBPhenotype:0000765 spindle elongation integrity defective early emb The embryos exhibit defects in the cell cycle process whereby the distance is lengthened between poles of the spindle.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00003325

0 Strain