WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00085017 Phenotype Remark  No ovulation. Neither intense contraction of the myoepithelial sheath nor dilation of the spermatheca took place.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002978 lev-11 Y105E8B.1 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8B.1k Y105E8B.1k 771   I: 14621514-14621596
CDS:Y105E8B.1o Y105E8B.1o 855   I: 14621514-14621596
CDS:Y105E8B.1p Y105E8B.1p 855   I: 14621514-14621596
CDS:Y105E8B.1s Y105E8B.1s 855   I: 14621514-14621596
CDS:Y105E8B.1a Y105E8B.1a 855   I: 14621514-14621596
CDS:Y105E8B.1l Y105E8B.1l 771   I: 14621514-14621596
CDS:Y105E8B.1m Y105E8B.1m 582   I: 14621514-14621596
CDS:Y105E8B.1n Y105E8B.1n 468   I: 14621514-14621596
CDS:Y105E8B.1q Y105E8B.1q 855   I: 14621514-14621596
CDS:Y105E8B.1r Y105E8B.1r 855   I: 14621514-14621596

1 Laboratories

Primary Identifier
ON

8 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0001260 oocyte morphology variant Haploid female germ cells (oocytes) exhibit variations in their overall structure, appearance or contents compared to control.
WBPhenotype:0000273 thrashing reduced The number of body thrashes within an aqueous environment in a given period of time are reduced compared with control worms.
WBPhenotype:0000666 ovulation variant Any variation that disrupts the release of a mature oocyte into the spermatheca (for subsequent fertilization), compared to control.
WBPhenotype:0000668 endomitotic oocytes Any variation that results in the presence of mature oocytes with distended polyploid nuclei. In C. elegans, such oocytes mature and exit diakinesis, but are often not properly ovulated or fertilized.
WBPhenotype:0001018 cytokinesis variant emb Any variation that disrupts the cytoplasmic division of a cell during embryonic development compared to control.
WBPhenotype:0000979 spermatheca dilation defective Animals exhibit defects in any physical or chemical process involved in the dilation of the distal spermatheca which is required for the oocyte exit from the gonad arm.
WBPhenotype:0001199 gonad sheath contractions variant Animals exhibit variations in any physical or chemical process required for the contraction of a thin continuous tube surrounding the proximal portions of the ovary and covering the maturing oocytes to the near portion of the distal gonad arm, compared to control (Wormatlas).

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000105 oocyte meiotic maturation variant Variations in the progression of a developing oocyte, from diakinesis to metaphase (meiosis I), in response to a signal compared to control animals. Meiotic maturation is accompanied by nuclear envelope breakdown (germinal vesicle breakdown), cytoskeletal rearrangement and meiotic spindle assembly.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00013408

0 Strain