WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00083298 Genotype  AJM-1::GFP
Phenotype Remark  Hypodermal cells of the developing embryo failed to migrate properly toward the ventral midline, thus resulting in a ventral enclosure defect Remark  Authors report that clone yk170f5 was used to target arx-1 for knockdown, which maps to an intron of the arx-1 gene and an exon of the gene Y71F9AL.6; results should be interpreted with caution

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022111 Y71F9AL.6 Y71F9AL.6 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9AL.6 Y71F9AL.6 816   I: 2890446-2891261

1 Laboratories

Primary Identifier
YM

2 Phenotype

Identifier Name Description
WBPhenotype:0001908 ventral closure defective The animal displays defects in any step of the ventral enclosure process resulting an embryo that is not enclosed and or with interior cells protruding out of the embryo.
WBPhenotype:0000703 epithelial morphology variant Variations in the form, composition or structure of the layer of cells that cover the external surface of an organism and form the inner lining between the tissues and organs of that organism and the external environment compared to control. In C. elegans epithelial cells include epithelium of the alimentary tract, intestinal cells, hypodermis, interfacial cells and somatic gonad cells (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005843

0 Strain