WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00088603 Genotype  rrf-3(pk1426)
Remark  jun-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007633 C16D2.1 C16D2.1 Caenorhabditis elegans
WBGene00012005 jun-1 T24H10.7 Caenorhabditis elegans

9 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24H10.7a T24H10.7a 960   II: 9113291-9113402
CDS:T24H10.7b T24H10.7b 900   II: 9116676-9116727
CDS:T24H10.7f T24H10.7f 804   II: 9118553-9118580
CDS:T24H10.7g T24H10.7g 528   II: 9122313-9122492
CDS:T24H10.7d T24H10.7d 468   II: 9127413-9127627
CDS:T24H10.7e T24H10.7e 495   II: 9129412-9129653
CDS:T24H10.7c T24H10.7c 306   II: 9130837-9130889
CDS:T24H10.7h T24H10.7h 762   II: 9120190-9120296
CDS:T24H10.7i T24H10.7i 651   II: 9120806-9120918

1 Laboratories

Primary Identifier
HY

2 Phenotype

Identifier Name Description
WBPhenotype:0002059 pore forming toxin hypersensitive Animals respond to pore forming toxins at a lower concentration or a shorter exposure compared to control animals. Increased susceptibility to pore forming toxins (e.g. Cry5B from Bacillus thuringiensis) is often measured by a decrease in the rate of survival in the presence of pore forming toxins compared to controls.
WBPhenotype:0002057 Bacillus thuringiensis toxin hypersensitive Animals respond to Bacillus thuringiensis toxins (Bt toxins) at a lower concentration or a shorter exposure compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038231

0 Strain