WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00081972 Phenotype Remark  GFP::H2B::nos-2 is expressed in all cells in the embryo. In wild-type it is expressed only in P4

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003230 mex-5 W02A2.7 Caenorhabditis elegans
WBGene00003231 mex-6 AH6.5 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:AH6.5 AH6.5 1404   II: 9524181-9524309
CDS:W02A2.7 W02A2.7 1407   IV: 13353730-13353843

1 Laboratories

Primary Identifier
JH

4 Phenotype

Identifier Name Description
WBPhenotype:0001276 ectopic expression transgene Any variation in the cellular expression of a gene product produced by exogenous DNA that has been introduced into the organism such that it now expresses in cells/tissues not seen when compared to the expression of that gene product in control animals.
WBPhenotype:0001794 cytoplasmic processing body variant Discrete foci within the cytoplasm containing congregations of mRNA translational suppression and degradation mechanisms vary in their arrangement, clustering or are otherwise not well-defined compared to control.
WBPhenotype:0001301 P granule abnormal Localization or structural appearance of P-granules is altered compared to control. P-granules are cytoplasmic structures associated with germ nuclei in the C. elegans gonad, and are localized exclusively to germ cells, or germ cell precursors, throughout the life cycle.
WBPhenotype:0001826 RNA degradation variant Variations in the regulated breakdown of RNA species via the action of cellular enzymes (RNases) compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00032091

0 Strain