WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00108488 Genotype  pek-1(ok275)
Phenotype Remark  "To identify additional genes that are required for development of the ire-1(v33) deletion mutant in C. elegans, we used feeding-mediated RNAi analysis to screen for genes that exhibit a synthetic larval lethal/severe growth defect and intestinal degeneration in the ire-1(v33) mutant but not in the pek-1(ok275) mutant. Screening of 16,757 genes covering 87% of the C. elegans genome did not identify any genes except for ire-1 and xbp-1 that exhibit synthetic lethality with only the pek-1(ok275) mutant." Remark  ire-1 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002147 ire-1 C41C4.4 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41C4.4a C41C4.4a 2904   II: 8112670-8112843
CDS:C41C4.4b C41C4.4b 1878   II: 8112670-8112843

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041065

0 Strain