WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086612 Phenotype Remark  dre-1 RNAi results in a precocious seam cell fusion phenotype in which 70% of worms exhibit seam cell fusion prior to the L3 molt at 54% of seam cells on average

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001089 dre-1 K04A8.6 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04A8.6a K04A8.6a 2811   V: 6533990-6534116
CDS:K04A8.6b K04A8.6b 3069   V: 6533990-6534116

1 Laboratories

Primary Identifier
AA

3 Phenotype

Identifier Name Description
WBPhenotype:0000280 breaks in alae The small linear ridges running along the lateral lines of the cuticle, lengthwise along the body, contain gaps as opposed to a continuous arrangement (Wormatlas).
WBPhenotype:0000167 precocious seam cell fusion Seam cells fuse to form a continuous syncytium along the body wall at an earlier stage of development compared to control.
WBPhenotype:0000170 precocious alae Formation of alae occurs earlier in development compared to control animals; In C. elegans, adult lateral alae are typically generated during the late L4 stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029151

1 Strain

WormBase ID
WBStrain00000001