WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00115702 Phenotype Remark  Downregulation of pig-1 by RNAi leads to a decreased thermal tolerance in aged nematodes.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021012 pig-1 W03G1.6 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03G1.6b W03G1.6b 2100   IV: 513758-514176
CDS:W03G1.6f W03G1.6f 1368   IV: 513758-514176
CDS:W03G1.6d W03G1.6d 2109   IV: 513758-514185
CDS:W03G1.6a W03G1.6a 2112   IV: 507058-507147
CDS:W03G1.6c W03G1.6c 2121   IV: 507058-507147
CDS:W03G1.6e W03G1.6e 1380   IV: 507058-507147
CDS:W03G1.6g W03G1.6g 1389   IV: 507058-507147
CDS:W03G1.6h W03G1.6h 1377   IV: 513758-514185

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001273 organism heat response variant Any variation in the state or activity of an organism (in terms of movement, gene expression, etc.) in response to heat (high temperatures above the optimal temperature for that organism), compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00061476

1 Strain

WormBase ID
WBStrain00000001