WormMine: Gene WBGene00023729

• WormBase Gene ID: WBGene00023729
• Gene Name: Cbr-ego-1
• Sequence Name: CBG00321
• Organism: Caenorhabditis briggsae
• Automated Description: Predicted to enable RNA-dependent RNA polymerase activity. Is an ortholog of C. elegans ego-1. In C. elegans, ego-1 is involved in gamete generation; nuclear pore localization; and regulatory ncRNA-mediated post-transcriptional gene silencing.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG00321.1	CBG00321.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG00321	CBG00321		[unknown]

0 RNAi Result

7 Allele

• WBVar00141120
• WBVar00141121
• WBVar00037234
• WBVar00008864
• WBVar00061338
• WBVar00061343
• WBVar00061348

0 Chromosome

0 Chromosome Location

2 Data Sets

• WormBaseAcedbConverter
• GO Annotation data set

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in Cbr-htz-1(gu167) comparing to in AF16.	DESeq2, FDR < 0.05.	WBPaper00059178:Cbr-htz-1(gu167)_upregulated
	Transcripts that showed significantly increased expression in Cbr-spr-4(gu163) comparing to in AF16.	DESeq2, FDR < 0.05.	WBPaper00059178:Cbr-spr-4(gu163)_upregulated

1 Expression Patterns

• Primary Identifier: Expr1069389
• Remark: Cbr-ego-1, GCCGTCAAAGTGCCCATCAAAACGTATGTGACCGGACAGGAGATCTCAACACAAATGGCT, WBGene00023729
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

1 GO Annotation

0 Homologues

0 Locations

1 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term