WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00024777 Gene Name  Cbr-pmk-2
Sequence Name  ? CBG01554 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity and MAP kinase activity. Is an ortholog of C. elegans pmk-2. In C. elegans, pmk-2 is involved in intracellular signal transduction and response to osmotic stress. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG01554.1 CBG01554.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG01554 CBG01554   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-pmk-2, AATTTCAGTTTCCAGTGCTCTTCGTCATGACTACCTTCGAGAGTATTCCGTTCCAAATGA, WBGene00024777   Expr1061945 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  enables

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term