WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00024894 Gene Name  Cbr-gbb-2
Sequence Name  ? CBG01699 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable G protein-coupled GABA receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans gbb-2. In C. elegans, gbb-2 is involved in G protein-coupled receptor signaling pathway; negative regulation of cholinergic synaptic transmission; and response to xenobiotic stimulus. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

6 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG01699a.1 CBG01699a.1   [unknown]
Transcript:CBG01699a.3 CBG01699a.3   [unknown]
Transcript:CBG01699a.2 CBG01699a.2   [unknown]
Transcript:CBG01699a.5 CBG01699a.5   [unknown]
Transcript:CBG01699a.4 CBG01699a.4   [unknown]
Transcript:CBG01699b.1 CBG01699b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG01699a CBG01699a   [unknown]
CDS:CBG01699b CBG01699b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG01699, TCCCAGAAGTGGAAAAGTGTTATTCATCGAATTCAGGAGTCTTTCAAGCAGTTCTTTATG, WBGene00024894   Expr1061102 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  located_in
  enables

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  located_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term