WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00025324 Gene Name  Cbr-snx-27
Sequence Name  ? CBG02242 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable phosphatidylinositol binding activity. Predicted to be involved in intracellular protein transport. Is an ortholog of C. elegans snx-27. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG02242a.1 CBG02242a.1   [unknown]
Transcript:CBG02242b.1 CBG02242b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG02242b CBG02242b   [unknown]
CDS:CBG02242a CBG02242a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG02242, TGGACGAATTCTTGGAAATGGCGAGAAATCTCGAAGGATATAATCAGGTCACATTTCCAC, WBGene00025324   Expr1065456 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term