WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00027210 Gene Name  Cbr-slc-25A29
Sequence Name  ? CBG04567 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in transmembrane transport. Is an ortholog of C. elegans slc-25A29. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG04567b.1 CBG04567b.1   [unknown]
Transcript:CBG04567a.1 CBG04567a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG04567b CBG04567b   [unknown]
CDS:CBG04567a CBG04567a   [unknown]

0 RNAi Result

14 Allele

Public Name
WBVar00109517
WBVar00109514
WBVar00109515
WBVar00109516
WBVar00051724
WBVar00051719
WBVar00020349
WBVar00020319
WBVar00020354
WBVar00020324
WBVar00020329
WBVar00020334
WBVar00020339
WBVar00020344

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG04567, GACGTATCGCCTTCTTCTCGACTTCAATCTTCTCAGCAACGTCACCAAAGAAGCTGAAAA, WBGene00027210   Expr1054957 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term