WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00030270 Gene Name  Cbr-herc-1
Sequence Name  ? CBG08488 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ubiquitin-protein transferase activity. Is an ortholog of C. elegans herc-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG08488.1 CBG08488.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG08488 CBG08488   [unknown]

0 RNAi Result

15 Allele

Public Name
WBVar00136921
WBVar00136922
WBVar00113629
WBVar00113630
WBVar00113631
WBVar00053069
WBVar00053074
WBVar00053039
WBVar00053034
WBVar00053029
WBVar00053059
WBVar00053054
WBVar00053064
WBVar00053049
WBVar00053044

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG08488, TGGAGAAATCAAAACTGTGGAATTGATACCCGGTGGAGATGAGAAACCAGTCACCAAAGA, WBGene00030270   Expr1064208 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term